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Welcome to the SNPduo website. This tool is designed to provide an analysis of Single Nucleotide Polymorphism (SNP) data between any two individuals. It has been designed based on data exported from Affymetrix CNAT 4.0 or Illumina Beadstudio, as well as data downloaded from the HapMap project. However, provided that the data is formatted correctly SNPduo can analyze any SNP data.

Run SNPduo Click to run the SNPduo tool
Introduction An introduction into the function of SNPduo
Tutorial A tutorial for first-time SNPduo users. Covers the analysis of Affymetrix, Illumina, HapMap, and custom format data
Sample Output Visual examples of the types of Identity by State patterns identified with SNPduo
Code The code for running SNPduo locally is available for download, and includes files written in html, css, R, C, and perl.
Credits and Contact Please send us questions, comments, or report bugs in using the software


*Updates and Notices*
During a recent server migration SNPduo service was interrupted, but it has been restored (Aug 07, 2008)

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